Jiandong Shi, PhD
Department of Statistics
The Chinese University of Hong Kong
Office: Room 101, Lady Shaw Building
Phone: (852) 6856-2873
Email: jiandongshi(at)cuhk.edu.hk
Experience
Postdoctoral Fellow (2024-) supervised by Prof. Xiaodan Fan, Department of Statistics, The Chinese University of Hong Kong
Postdoctoral Fellow (2022-2024) supervised by Prof. Weichuan Yu, Department of Electronic and Computer Engineering, Hong Kong University of Science and Technology
PhD in Statistics (2021) supervised by Prof. Tiejun Tong, Department of Mathematics, Hong Kong Baptist University
MSc in Statistics (2018) supervised by Prof. Lu Lin, Department of Mathematics, Shandong University
BSc in Statistics (2015), Department of Mathematics, Shandong University
Research interests
Statistics: Meta-analysis, Bayesian analysis, Medical statistics, Statistical learning
Boinformatics: Third generation sequencing data analysis, Structural variant detection
Evidence-based medicine
Publications (Google Scholar) * represents co-first authors
Direct inference of haplotypes from sequencing data
Zhen Zhang, Bencong Zhu, Yongyi Luo, Jiandong Shi, Sheng Lian, Jingyu Hao, Taobo Hu,
Toyotaka Ishibashi, Depeng Wang, Shu Wang, Weichuan Yu and Xiaodan Fan (2025+).
Under review in Briefings in Bioinformatics
BVSim: a benchmarking variation simulator mimicking human variation spectrum
Yongyi Luo, Zhen Zhang, Jiandong Shi, Jingyu Hao, Sheng Lian, Taobo Hu, Toyotaka Ishibashi,
Depeng Wang, Shu Wang, Weichuan Yu and Xiaodan Fan (2025+).
Invited revision in GigaScience
Bayesian integrative detection of structural variations with false discovery rate control
Sheng Lian, Jiandong Shi, Jingyu Hao, Zhen Zhang, Yongyi Luo, Taobo Hu, Depeng Wang,
Xiaodan Fan, Shu Wang and Weichuan Yu (2025+).
Under review in BMC Bioinformatics
gSV: a general structural variant detector using long-read sequencing data
Jingyu Hao*, Jiandong Shi*, Sheng Lian, Zhen Zhang, Taobo Hu, Toyotaka Ishibashi, Depeng
Wang, Shu Wang, Xiaodan Fan and Weichuan Yu (2025+).
Under review in Genome Biology
Local moment for heterogenous regression and its application to
estimation and local change-point detection
Lu Lin and Jiandong Shi (2025).
Communications in Mathematics and Statistics, in press
DCES-PA: Deformation-controllable elastic shape model
for 3D bone proliferation analysis using hand HR-pQCT images
Xuechen Zhang, Isaac Cheng, Yingzhao Jin, Jiandong Shi, Chenrui Li, Jing-Hao Xue, Lai-
Shan Tam and Weichuan Yu (2024).
Computers in Biology and Medicine, 175: 108533
Detecting the skewness of data from the five-number summary and its application in meta-analysis
Jiandong Shi, Dehui Luo, Xiang Wan, Yue Liu, Jiming Liu, Zhaoxiang Bian and Tiejun Tong (2023).
Statistical Methods in Medical Research, 32: 1338–1360
-- This paper has been recognized as a Highly Cited Paper (and a Hot Paper since July 2024) in ISI Web of Science,
with a total of citations 90+ times (and 120+ times in Google Scholar) as of March 2025.
[Online Calculator]
Detection of structural variations
and fusion genes in breast cancer samples using third-generation sequencing
Taobo Hu, Jingjing Li, Mengping Long, Jinbo Wu, Zhen Zhang, Fei Xie, Jin Zhao, Houpu
Yang, Qianqian Song, Sheng Lian, Jiandong Shi, Xueyu Guo, Daoli Yuan, Dandan Lang,
Guoliang Yu, Baosheng Liang, Xiaohua Zhou,
Toyotaka Ishibashi, Xiaodan Fan, Weichuan Yu,
Depeng Wang, Yang Wang, I-Feng Peng, and Shu Wang (2022).
Frontiers in Cell and Developmental Biology, 10: 854640
基于中位数的荟萃分析新发展
Jiandong Shi, Dehui Luo, Jiming Liu and Tiejun Tong (2021).
科学观察, 16: 82-84
Meta-analysis with zero-event studies: a comparative study with application to COVID-19 data
Jiajin Wei, Enxuan Lin, Jiandong Shi, Ke Yang, Zongliang Hu, Xian-Tao Zeng and Tiejun Tong (2021).
Military Medical Research, 8: 41
Optimally estimating the sample standard deviation from the five-number summary
Jiandong Shi, Dehui Luo, Hong Weng, Xian-Tao Zeng, Lu Lin, Haitao Chu and Tiejun Tong (2020).
Research Synthesis Methods, 11: 641-654
-- This paper has been recognized as a Highly Cited Paper (and a Hot paper in 2022) in ISI Web of Science, with a total of 300+ citations (and 400+ citations in Google Scholar) as of March 2025.
-- This paper has been recognized as a top cited paper in Research Synthesis Methods for all papers published between 1 January 2020 and 31 December 2021.
[Online Calculator]
[Excel Worksheet]
Estimating the mean and variance from the five-number summary of a log-normal distribution
Jiandong Shi, Tiejun Tong, Yuedong Wang and Marc G. Genton (2020).
Statistics and Its Interface (Special Issue on Meta-Analysis), 13: 519-531
Patent
Methods and systems for detecting structural variants
Weichuan Yu, Jiandong Shi and Jingyu Hao (2025+).
In preparation
Working papers
A new definition of standardized mean difference allowing for unequal variances
Jiandong Shi, Xiaochen Zhang, Lu Lin, Hiu Yee Kwan and Tiejun Tong.
In preparation to Psychological Methods
A paradox in Metropolis-Hastings practice
Jiandong Shi, Jiandong Shi, Sheng Lian and Xiaodan Fan.
In preparation to Bayesian Analysis
Semiparametric efficient estimators for random-effects meta-analysis
Jiajin Wei, Jiandong Shi, Yanyuan Ma and Tiejun Tong.
In preparation to Journal of the American Statistical Association
A new paradox in random-effects meta-analysis
Jiandong Shi, Aimin Wu and Tiejun Tong.
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